I'm sorry if my wiring diagram seems "useless"
I can't make a wiring diagram for every possible set up since no two bikes are exactly alike. Some have turn signals, starters, relays for starters, different ignitions, etc... And yes, that wiring diagram is for the charging system ONLY. The rest of your bike will operate just like normal off of the stock harness. If you are keeping the stock wiring harness, all you have to do is remove the stock charging system (just unlug it if you want, don't have to remove all the wiring) and install the new system and everything runs off of the battery/fuse panel just like stock...
Rwingsfan is right on the money
if you are wiring a bike from scratch.
Charging is one setup, ignition is another, and then all the lights and other odds and ends are on a 3rd circuit. You can wire all of those things "Loose" on the bike, make sure it all operates as it should, and then start tidying up things, shortening wiring, hiding it in the frame, etc... I can go on for days and days about wiring, but there is not great way to make a "one size fits all" wiring diagram.
Jcadwell, your regulator will go out in the mail today. I do not have all the exact specifications from it, but it does fit in the stock location. I'm not at the shop today unfortunately to get all the measurements.
xjwmx, I have no idea what you mean by "calling out a few regulators" - You cannot use a stock XS650 regulator, so you will be needing a 3 phase Regulator to make the swap. I keep these in stock for about the same price new as you can find on ebay used. And yes, if you want to gamble on a used regulator, the regulator that matches the used stator you find will work as well, I just don't trust old regulators much.
At this point, I've sold over 300 of these swap kits and regulators, mostly by advertising on the Chop Cult and my blog. Its a simple swap, you guys are overcomplicating it. Its definitely easier to wire up this system (from scratch) than it is to wire up the stock charging system (less wires, less mess)
Whew....... Any other questions