I don't believe that with these parts companies there will ever be one best place. Sure, there will probably be one that constantly does a person well, be it Boats, Partzilla or Stadium (as in my limited experience). The prices seem to vary place to place as does the stock situation. I've seen items on Partzilla that Stadium didn't have.
On my most recent purchase (2004 Yamaha Road Star Warrior clutch boss assay 5PX-16370-10-00), I did price compare Partzilla and Stadium. Stadium was $40 less on price whereas the shipping was only $3 more. In that particular case, it was cheaper to go there. That order was for 1 fair sized item that was over $100. I may have a different experience with several smaller, cheaper items as YL76 had. Interestingly enough, ronayres.com did not have the item.
I have a handful of sites bookmarked and when ever I place an order, I put it in all the sites and see who's cheapest. At the end of the day though, sometimes it's best to go with a company you have familiarity with even it is a little more (no too much more though).