Yes, some of the Lycoming's.... and P&W's iirc. Think there was also a model of the Franklin that used taper. It wasn't much... about 5 thou as I remember.
The heads and cylinders were all one piece... actually they were two pieces, joined at the factory into one piece. You couldn't take 'em apart after that.
The reason.... most of the heat is concentrated in the head and the top part of the cylinder. Remember, these are air cooled engines. Anyway.... that's where most of the expansion was, up by the head. Once the engine was up to normal operating temperature, the taper went away.... it was a straight bore, until it cooled down again and the taper returned.